DNA-Binding Proteins

Colonnetta, Megan, Juan Abrahante, Paul Schedl, Daryl Gohl, and Girish Deshpande. (2021) 2021. “CLAMP Regulates Zygotic Genome Activation in Drosophila Embryos”. Genetics 219 (2). doi:10.1093/genetics/iyab107.

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Chetverina, Darya, Maksim Erokhin, and Paul Schedl. (2021) 2021. “GAGA Factor: A Multifunctional Pioneering Chromatin Protein”. Cell Mol Life Sci 78 (9): 4125-41. doi:10.1007/s00018-021-03776-z.

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Kyrchanova, Olga, Oksana Maksimenko, Airat Ibragimov, Vladimir Sokolov, Nikolay Postika, Maria Lukyanova, Paul Schedl, and Pavel Georgiev. (2020) 2020. “The Insulator Functions of the Polydactyl C2H2 Zinc Finger Protein CTCF: Necessity Versus Sufficiency”. Sci Adv 6 (13): eaaz3152. doi:10.1126/sciadv.aaz3152.

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Shukla, Vallari, Neena Dhiman, Prajna Nayak, Neelesh Dahanukar, Girish Deshpande, and Girish Ratnaparkhi. (2018) 2018. “Stonewall and Brickwall: Two Partially Redundant Determinants Required for the Maintenance of Female Germline in ”. G3 (Bethesda) 8 (6): 2027-41. doi:10.1534/g3.118.200192.

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Kyrchanova, Olga, Nikolay Zolotarev, Vladic Mogila, Oksana Maksimenko, Paul Schedl, and Pavel Georgiev. (2017) 2017. “Architectural Protein Pita Cooperates With DCTCF in Organization of Functional Boundaries in Bithorax Complex”. Development 144 (14): 2663-72. doi:10.1242/dev.149815.

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Graham, Patricia, Jill Penn, and Paul Schedl. (2003) 2003. “Masters Change, Slaves Remain.”. Bioessays 25 (1): 1-4. doi:10.1002/bies.10207.

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Schweinsberg, Susan, Kirsten Hagstrom, Daryl Gohl, Paul Schedl, Ram Kumar, Rakesh Mishra, and Francois Karch. (2004) 2004. “The Enhancer-Blocking Activity of the Fab-7 Boundary from the Drosophila Bithorax Complex Requires GAGA-Factor-Binding Sites.”. Genetics 168 (3): 1371-84. doi:10.1534/genetics.104.029561.

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Greenberg, Anthony, Judith Yanowitz, and Paul Schedl. (2004) 2004. “The Drosophila GAGA Factor Is Required for Dosage Compensation in Males and for the Formation of the Male-Specific-Lethal Complex Chromatin Entry Site at 12DE.”. Genetics 166 (1): 279-89.

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Deshpande, Girish, Gretchen Calhoun, and Paul Schedl. (2004) 2004. “Overlapping Mechanisms Function to Establish Transcriptional Quiescence in the Embryonic Drosophila Germline.”. Development 131 (6): 1247-57. doi:10.1242/dev.01004.

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Blanton, Jason, Miklos Gaszner, and Paul Schedl. (2003) 2003. “Protein:Protein Interactions and the Pairing of Boundary Elements in Vivo.”. Genes Dev 17 (5): 664-75. doi:10.1101/gad.1052003.

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Tan, Lihua, Paul Schedl, Ho-Juhn Song, Dan Garza, and Mary Konsolaki. 2008. “The Toll-->NFkappaB Signaling Pathway Mediates the Neuropathological Effects of the Human Alzheimer’s Abeta42 Polypeptide in Drosophila.”. PLoS One 3 (12): e3966. doi:10.1371/journal.pone.0003966.

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Kappes, Gretchen, Girish Deshpande, Brett Mulvey, Jamila Horabin, and Paul Schedl. (2011) 2011. “The Drosophila Myc Gene, Diminutive, Is a Positive Regulator of the Sex-Lethal Establishment Promoter, Sxl-Pe.”. Proc Natl Acad Sci U S A 108 (4): 1543-8. doi:10.1073/pnas.1017006108.

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Aoki, Tsutomu, Ali Sarkeshik, John Yates, and Paul Schedl. (2012) 2012. “Elba, a Novel Developmentally Regulated Chromatin Boundary Factor Is a Hetero-Tripartite DNA Binding Complex.”. Elife 1: e00171. doi:10.7554/eLife.00171.

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Graham, Patricia, Judith Yanowitz, Jill Penn, Girish Deshpande, and Paul Schedl. (2011) 2011. “The Translation Initiation Factor eIF4E Regulates the Sex-Specific Expression of the Master Switch Gene Sxl in Drosophila Melanogaster.”. PLoS Genet 7 (7): e1002185. doi:10.1371/journal.pgen.1002185.

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Wolle, Daniel, Fabienne Cleard, Tsutomu Aoki, Girish Deshpande, Paul Schedl, and Francois Karch. (2015) 2015. “Functional Requirements for Fab-7 Boundary Activity in the Bithorax Complex.”. Mol Cell Biol 35 (21): 3739-52. doi:10.1128/MCB.00456-15.

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Aoki, Tsutomu, Daniel Wolle, Ella Preger-Ben Noon, Qi Dai, Eric Lai, and Paul Schedl. 2014. “Bi-Functional Cross-Linking Reagents Efficiently Capture Protein-DNA Complexes in Drosophila Embryos.”. Fly (Austin) 8 (1): 43-51. doi:10.4161/fly.26805.

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Lomaev, Dmitry, Anna Mikhailova, Maksim Erokhin, Alexander Shaposhnikov, James Moresco, Tatiana Blokhina, Daniel Wolle, et al. 2017. “The GAGA Factor Regulatory Network: Identification of GAGA Factor Associated Proteins”. PLoS One 12 (3): e0173602. doi:10.1371/journal.pone.0173602.

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